Closed GoogleCodeExporter closed 9 years ago
- Remove all intances of "pf:"
- Change "-" to optional for attributes as requested by a reviewer
Original comment by andrewro...@googlemail.com
on 21 Jul 2009 at 12:41
After a first look, I would change the following:
- "Cosmetic change": the tables in the spec doc for elements 6.7
(SequenceCollection)and 6.15 (DBSequence) need to be resized in order to fit in
the page.
- In point 7.3, the example must be updated in order to change the translation
frames
to include now 1,2,3,-1,-2,-3.
- I would add Florian Reisinger from the PRIDE team, to the list of
acknowledgements,
since he contributed to the new schema.
Original comment by javizca74@gmail.com
on 22 Jul 2009 at 3:05
A section about the element <SpectrumIdentificationItem> is missing, as well as
its
graphical context, which I have grabbed, but could not include.
Original comment by eisena...@googlemail.com
on 23 Jul 2009 at 3:39
A "graphical context" paragraph is missing for element <mzIdentML>, for which I
grabbed an image, but not include
Original comment by eisena...@googlemail.com
on 23 Jul 2009 at 3:45
It seems that there are some elements missing in the automatically generated
part of
the schema desription, e.g.:
<Measure>
<SpectrumIdentificationItem>
<ProteinDetectionHypothesis>
<PeptideEvidence>
<Fragmentation>
<PeptideHypothesis>
<IonType>
<FragmentArray>
In the AnalysisXML spec doc these were listed after <Exclude>, which is here
the last
described element.
Original comment by eisena...@googlemail.com
on 23 Jul 2009 at 4:18
The example for Sample doesn't show the use of sub samples. The only one that
does
this is the 15N example - could maybe swap it for that one?
7.6 Database Filter
Example needs updating from Mascot 15N example
The paragraph after the example is no longer correct. Can probably just be
removed?
7.7 Do we still have any <ParamType>?
Original comment by dcre...@gmail.com
on 23 Jul 2009 at 5:03
Original comment by eisena...@googlemail.com
on 20 Aug 2009 at 11:29
Original issue reported on code.google.com by
andrewro...@googlemail.com
on 21 Jul 2009 at 12:39