Open GoogleCodeExporter opened 9 years ago
I have made a proposal to the 1.2-candidate schema to add the following to the
documentation for start and end:
"If the search method identifies a peptide the cannot be unambigously mapped to
a start position in the referenced protein, a code of -1 MUST be used."
If we start accepting a few minor schema changes in mzid 1.2, I could also be
persuaded to make these attributes mandatory - there is no good reason for them
to be optional AND there be error codes for unknown values.
I have temporarily removed the documentation about de novo searches, since we
will likely change this section anyway, following issue 82
Original comment by andrewro...@googlemail.com
on 24 Jan 2014 at 9:36
Discussed today - decision to allow error codes of -1 for start and stop. Keep
them as optional for now (since we don't want to make any schema changes that
could break existing examples), but strongly encourage their use
Original comment by andrewro...@googlemail.com
on 31 Jan 2014 at 4:20
Original issue reported on code.google.com by
andrewro...@googlemail.com
on 4 Jul 2013 at 3:37