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mwang87 / MetabolomicsSpectrumResolver

Metabolomics Spectrum Resolver/Displayer
https://metabolomics-usi.ucsd.edu/
MIT License
9 stars 1 forks source link

USIs not retrieved from MassIVE #139

Closed bittremieux closed 2 years ago

bittremieux commented 3 years ago

Some MSV USIs are not correctly found on MassIVE, with MassIVE returning a 500 error code. However, they do seem to work using the MassIVE native USI service. I'm not sure what's wrong with our code.

Example: mzspec:MSV000080918:SS279_RH9_01_7628.mzML:scan:2629

bittremieux commented 3 years ago

Side note: maybe we should just use the MassIVE ProXi interface instead? Would there any efficiency issues with that?

Nvm, the MassIVE ProXi response doesn't even contain precursor mass or charge. Seems like pretty essential information about a spectrum. 🤔

bittremieux commented 3 years ago

Possibly the same as #102.

bittremieux commented 2 years ago

This USI (mzspec:MSV000080918:SS279_RH9_01_7628.mzML:scan:2629) works now, so it must have been fixed on the MassIVE side.