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mwaskom / seaborn

Statistical data visualization in Python
https://seaborn.pydata.org
BSD 3-Clause "New" or "Revised" License
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Please consider staying compatible with matplotlib 1.1.1~rc2-1 (as in Debian stable) #175

Closed yarikoptic closed 10 years ago

yarikoptic commented 10 years ago

quite a few tests lead to error at

======================================================================
ERROR: seaborn.tests.test_linearmodels.TestDiscretePlots.test_factorplot_bar
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/tests/test_linearmodels.py", line 716, in test_factorplot_bar
    g = lm.factorplot("x", "y", "g", data=self.df, kind="bar")
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/linearmodels.py", line 864, in factorplot
    facets.map_dataframe(barplot, x, y, hue, **kwargs)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/axisgrid.py", line 375, in map_dataframe
    self._facet_plot(func, ax, args, kwargs)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/axisgrid.py", line 393, in _facet_plot
    func(*plot_args, **plot_kwargs)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/linearmodels.py", line 937, in barplot
    plotter.plot(ax)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/linearmodels.py", line 277, in plot
    prop={"size": mpl.rcParams["axes.labelsize"]})
TypeError: set_title() got an unexpected keyword argument 'prop'

and then there is also (and _orig counterpart fails similarly)

======================================================================
FAIL: seaborn.tests.test_rcmod.TestAxesStyle.test_reset_defaults
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/tmp/buildd/seaborn-0.3.1/.pybuild/pythonX.Y_2.7/build/seaborn/tests/test_rcmod.py", line 85, in test_reset_defaults
    nt.assert_equal(mpl.rcParamsDefault, mpl.rcParams)
AssertionError: {'axes.formatter.use_locale': False, 'figure.subplot.right': 0.9, 'mathtext.cal': 'cursive', 'font.fantasy': ['Comic Sans MS', 'Chicago', 'Charcoal', 'ImpactWestern', 'fantasy'], 'xtick.minor.pad': 4, 'tk.pythoninspect': False, 'image.aspect': 'equal', 'font.cursive': ['Apple Chancery', 'Textile', 'Zapf Chancery', 'Sand', 'cursive'], 'figure.subplot.hspace': 0.2, 'keymap.fullscreen': 'f', 'examples.directory': '', 'xtick.direction': 'in', 'axes.facecolor': 'w', 'mathtext.fontset': 'cm', 'ytick.direction': 'in', 'keymap.pan': 'p', 'path.snap': True, 'axes.axisbelow': False, 'lines.markersize': 6, 'figure.dpi': 80, 'text.usetex': False, 'image.origin': 'upper', 'patch.edgecolor': 'k', 'legend.labelspacing': 0.5, 'ps.useafm': False, 'mathtext.bf': 'serif:bold', 'text.antialiased': True, 'lines.solid_joinstyle': 'round', 'font.monospace': ['Bitstream Vera Sans Mono', 'DejaVu Sans Mono', 'Andale Mono', 'Nimbus Mono L', 'Courier New', 'Courier', 'Fixed', 'Terminal', 'monospace'], 'xtick.minor.size': 2, 'axes.formatter.limits': [-7, 7], 'figure.subplot.wspace': 0.2, 'font.serif': ['Bitstream Vera Serif', 'DejaVu Serif', 'New Century Schoolbook', 'Century Schoolbook L', 'Utopia', 'ITC Bookman', 'Bookman', 'Nimbus Roman No9 L', 'Times New Roman', 'Times', 'Palatino', 'Charter', 'serif'], 'image.cmap': 'jet', 'lines.marker': 'None', 'tk.window_focus': False, 'ytick.major.width': 0.5, 'backend.qt4': 'PyQt4', 'savefig.edgecolor': 'w', 'savefig.facecolor': 'w', 'ytick.minor.size': 2, 'font.stretch': 'normal', 'text.dvipnghack': None, 'ytick.color': 'k', 'svg.fonttype': 'path', 'lines.linestyle': '-', 'xtick.color': 'k', 'xtick.major.pad': 4, 'patch.facecolor': 'b', 'figure.figsize': [8.0, 6.0], 'axes.linewidth': 1.0, 'keymap.zoom': 'o', 'legend.handletextpad': 0.8, 'mathtext.fallback_to_cm': True, 'lines.linewidth': 1.0, 'savefig.dpi': 100, 'verbose.fileo': 'sys.stdout', 'svg.image_noscale': False, 'docstring.hardcopy': False, 'font.size': 12, 'ps.fonttype': 3, 'path.simplify': True, 'keymap.all_axes': 'a', 'polaraxes.grid': True, 'text.hinting': True, 'pdf.compression': 6, 'grid.linewidth': 0.5, 'legend.frameon': True, 'figure.autolayout': False, 'figure.facecolor': '0.75', 'xtick.minor.width': 0.5, 'ps.usedistiller': False, 'legend.isaxes': True, 'figure.edgecolor': 'w', 'mathtext.tt': 'monospace', 'contour.negative_linestyle': 'dashed', 'image.interpolation': 'bilinear', 'lines.markeredgewidth': 0.5, 'keymap.home': ['h', 'r', 'home'], 'axes3d.grid': True, 'axes.edgecolor': 'k', 'legend.shadow': False, 'ytick.minor.width': 0.5, 'axes.titlesize': 'large', 'backend': 'Agg', 'xtick.major.size': 4, 'keymap.xscale': ['k', 'L'], 'legend.fontsize': 'large', 'lines.solid_capstyle': 'projecting', 'mathtext.it': 'serif:italic', 'keymap.save': 's', 'font.variant': 'normal', 'toolbar': 'toolbar2', 'xtick.labelsize': 'medium', 'axes.unicode_minus': True, 'ps.distiller.res': 6000, 'axes.labelweight': 'normal', 'pdf.fonttype': 3, 'patch.linewidth': 1.0, 'pdf.inheritcolor': False, 'axes.color_cycle': ['b', 'g', 'r', 'c', 'm', 'y', 'k'], 'lines.dash_capstyle': 'butt', 'lines.color': 'b', 'figure.subplot.top': 0.9, 'pdf.use14corefonts': False, 'legend.markerscale': 1.0, 'patch.antialiased': True, 'font.style': 'normal', 'keymap.forward': ['right', 'v'], 'backend_fallback': True, 'legend.fancybox': False, 'grid.linestyle': ':', 'savefig.extension': 'auto', 'text.color': 'k', 'mathtext.rm': 'serif', 'legend.loc': 'upper right', 'interactive': False, 'cairo.format': 'png', 'savefig.orientation': 'portrait', 'svg.image_inline': True, 'ytick.major.size': 4, 'axes.grid': False, 'plugins.directory': '.matplotlib_plugins', 'grid.color': 'k', 'timezone': 'UTC', 'ytick.major.pad': 4, 'legend.borderpad': 0.4, 'examples.download': True, 'lines.dash_joinstyle': 'round', 'datapath': '/usr/share/matplotlib/mpl-data', 'lines.antialiased': True, 'text.latex.unicode': False, 'legend.handleheight': 0.7, 'image.lut': 256, 'figure.subplot.bottom': 0.1, 'text.latex.preamble': [''], 'legend.numpoints': 2, 'legend.handlelength': 2.0, 'keymap.grid': 'g', 'font.sans-serif': ['Bitstream Vera Sans', 'DejaVu Sans', 'Lucida Grande', 'Verdana', 'Geneva', 'Lucid', 'Arial', 'Helvetica', 'Avant Garde', 'sans-serif'], 'axes.labelcolor': 'k', 'font.family': 'sans-serif', 'xtick.major.width': 0.5, 'axes.labelsize': 'medium', 'ytick.minor.pad': 4, 'legend.borderaxespad': 0.5, 'mathtext.sf': 'sans\\-serif', 'axes.hold': True, 'verbose.level': 'silent', 'mathtext.default': 'it', 'figure.subplot.left': 0.125, 'legend.columnspacing': 2.0, 'text.latex.preview': False, 'font.weight': 'normal', 'keymap.yscale': 'l', 'image.resample': False, 'agg.path.chunksize': 0, 'path.simplify_threshold': 0.1111111111111111, 'ytick.labelsize': 'medium', 'ps.papersize': 'letter', 'svg.embed_char_paths': True, 'keymap.back': ['left', 'c', 'backspace']} != {'axes.formatter.use_locale': False, 'figure.subplot.right': 0.9, 'mathtext.cal': 'cursive', 'font.fantasy': ['Comic Sans MS', 'Chicago', 'Charcoal', 'ImpactWestern', 'fantasy'], 'xtick.minor.pad': 4, 'tk.pythoninspect': False, 'image.aspect': 'equal', 'font.cursive': ['Apple Chancery', 'Textile', 'Zapf Chancery', 'Sand', 'cursive'], 'figure.subplot.hspace': 0.2, 'keymap.fullscreen': 'f', 'examples.directory': '', 'xtick.direction': 'in', 'axes.facecolor': 'w', 'mathtext.fontset': 'cm', 'ytick.direction': 'in', 'keymap.pan': 'p', 'path.snap': True, 'axes.axisbelow': False, 'lines.markersize': 6, 'figure.dpi': 80, 'text.usetex': False, 'image.origin': 'upper', 'patch.edgecolor': 'k', 'legend.labelspacing': 0.5, 'ps.useafm': False, 'mathtext.bf': 'serif:bold', 'text.antialiased': True, 'lines.solid_joinstyle': 'round', 'font.monospace': ['Bitstream Vera Sans Mono', 'DejaVu Sans Mono', 'Andale Mono', 'Nimbus Mono L', 'Courier New', 'Courier', 'Fixed', 'Terminal', 'monospace'], 'xtick.minor.size': 2, 'axes.formatter.limits': [-7, 7], 'figure.subplot.wspace': 0.2, 'font.serif': ['Bitstream Vera Serif', 'DejaVu Serif', 'New Century Schoolbook', 'Century Schoolbook L', 'Utopia', 'ITC Bookman', 'Bookman', 'Nimbus Roman No9 L', 'Times New Roman', 'Times', 'Palatino', 'Charter', 'serif'], 'image.cmap': 'jet', 'lines.marker': 'None', 'tk.window_focus': False, 'ytick.major.width': 0.5, 'backend.qt4': 'PyQt4', 'savefig.edgecolor': 'w', 'savefig.facecolor': 'w', 'ytick.minor.size': 2, 'font.stretch': 'normal', 'text.dvipnghack': None, 'ytick.color': 'k', 'svg.fonttype': 'path', 'lines.linestyle': '-', 'xtick.color': 'k', 'xtick.major.pad': 4, 'patch.facecolor': 'b', 'figure.figsize': [8.0, 6.0], 'axes.linewidth': 1.0, 'keymap.zoom': 'o', 'legend.handletextpad': 0.8, 'mathtext.fallback_to_cm': True, 'lines.linewidth': 1.0, 'savefig.dpi': 100, 'verbose.fileo': 'sys.stdout', 'svg.image_noscale': False, 'docstring.hardcopy': False, 'font.size': 12, 'ps.fonttype': 3, 'path.simplify': True, 'keymap.all_axes': 'a', 'polaraxes.grid': True, 'text.hinting': True, 'pdf.compression': 6, 'grid.linewidth': 0.5, 'legend.frameon': True, 'figure.autolayout': False, 'figure.facecolor': '0.75', 'xtick.minor.width': 0.5, 'ps.usedistiller': False, 'legend.isaxes': True, 'figure.edgecolor': 'w', 'mathtext.tt': 'monospace', 'contour.negative_linestyle': 'dashed', 'image.interpolation': 'bilinear', 'lines.markeredgewidth': 0.5, 'keymap.home': ['h', 'r', 'home'], 'axes3d.grid': True, 'legend.scatterpoints': 1, 'axes.edgecolor': 'k', 'legend.shadow': False, 'ytick.minor.width': 0.5, 'axes.titlesize': 'large', 'backend': 'Agg', 'xtick.major.size': 4, 'keymap.xscale': ['k', 'L'], 'legend.fontsize': 'large', 'lines.solid_capstyle': 'projecting', 'mathtext.it': 'serif:italic', 'keymap.save': 's', 'font.variant': 'normal', 'toolbar': 'toolbar2', 'xtick.labelsize': 'medium', 'axes.unicode_minus': True, 'ps.distiller.res': 6000, 'axes.labelweight': 'normal', 'pdf.fonttype': 3, 'patch.linewidth': 1.0, 'pdf.inheritcolor': False, 'axes.color_cycle': ['b', 'g', 'r', 'c', 'm', 'y', 'k'], 'lines.dash_capstyle': 'butt', 'lines.color': 'b', 'figure.subplot.top': 0.9, 'pdf.use14corefonts': False, 'legend.markerscale': 1.0, 'patch.antialiased': True, 'font.style': 'normal', 'keymap.forward': ['right', 'v'], 'backend_fallback': True, 'legend.fancybox': False, 'grid.linestyle': ':', 'savefig.extension': 'auto', 'text.color': 'k', 'mathtext.rm': 'serif', 'legend.loc': 'upper right', 'interactive': False, 'cairo.format': 'png', 'savefig.orientation': 'portrait', 'svg.image_inline': True, 'ytick.major.size': 4, 'axes.grid': False, 'plugins.directory': '.matplotlib_plugins', 'grid.color': 'k', 'timezone': 'UTC', 'ytick.major.pad': 4, 'legend.borderpad': 0.4, 'examples.download': True, 'lines.dash_joinstyle': 'round', 'datapath': '/usr/share/matplotlib/mpl-data', 'lines.antialiased': True, 'text.latex.unicode': False, 'legend.handleheight': 0.7, 'image.lut': 256, 'figure.subplot.bottom': 0.1, 'text.latex.preamble': [''], 'legend.numpoints': 2, 'legend.handlelength': 2.0, 'keymap.grid': 'g', 'font.sans-serif': ['Bitstream Vera Sans', 'DejaVu Sans', 'Lucida Grande', 'Verdana', 'Geneva', 'Lucid', 'Arial', 'Helvetica', 'Avant Garde', 'sans-serif'], 'axes.labelcolor': 'k', 'font.family': 'sans-serif', 'xtick.major.width': 0.5, 'axes.labelsize': 'medium', 'ytick.minor.pad': 4, 'legend.borderaxespad': 0.5, 'mathtext.sf': 'sans\\-serif', 'axes.hold': True, 'verbose.level': 'silent', 'mathtext.default': 'it', 'figure.subplot.left': 0.125, 'legend.columnspacing': 2.0, 'text.latex.preview': False, 'font.weight': 'normal', 'keymap.yscale': 'l', 'image.resample': False, 'agg.path.chunksize': 0, 'path.simplify_threshold': 0.1111111111111111, 'ytick.labelsize': 'medium', 'ps.papersize': 'letter', 'svg.embed_char_paths': True, 'keymap.back': ['left', 'c', 'backspace']}
mwaskom commented 10 years ago

What versions of Pandas and Statsmodels does it have?

mwaskom commented 10 years ago

I'm unable to make a conda virtual environment with

conda install numpy=1.6.2 pandas=0.13.1 statsmodels=0.5.0 matplotlib=1.1.1

If I can't run the tests myself, it's going to be difficult/impossible to keep the code compatible with this Debian stable environment.

yarikoptic commented 10 years ago

recent pandas/statsmodels should be available in those environments since I package/maintain and provide backports of those through NeuroDebian as well. you could see which versions at http://neuro.debian.net/pkgs/python-statsmodels.html http://neuro.debian.net/pkgs/python-pandas.html

Are you using debian or ubuntu? then 1 call to debootstrap could give you a basic core setup in a directory... let me know I will give more instructions. Otherwise -- you could just install NeuroDebian virtual appliance -- that one is wheezy (Debian stable) with neurodebian already enabled: http://neuro.debian.net/#get-neurodebian and select OSX or Windows are your OS ;)

yarikoptic commented 10 years ago

are you using vagrant or docker.io?

mwaskom commented 10 years ago

I just develop on OSX, but the bigger issue would be getting the testing running on Travis, where I use conda to manage the testing environment. (I don't trust myself to remember to run the tests, especially if it requires booting up a VM I don't otherwise use).

yarikoptic commented 10 years ago

On Tue, 22 Apr 2014, Michael Waskom wrote:

I just develop on OSX, but the bigger issue would be getting the testing running on Travis, where I use conda to manage the testing environment. (I don't trust myself to remember to run the tests, especially if it requires booting up a VM I don't otherwise use).

I understand your concern... what if I add seaborn to the http://nipy.bic.berkeley.edu/ farm -- then seaborn could get tested beyond conda deployments ? ;) the only thing which would be missing is integration with travis (no announcement to PRs etc) but I think even mail notifications should work... will do anyways and report back

Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Senior Research Associate, Psychological and Brain Sciences Dept. Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik

mwaskom commented 10 years ago

:+1:

yarikoptic commented 10 years ago

ok -- have a look at http://nipy.bic.berkeley.edu/waterfall?category=seaborn I will now add an email notifier, including myself, to see if it works ;)

yarikoptic commented 10 years ago

ok -- seems to be sending notices on failures, but buildbot didn't consider you as "interested" user since I guess I have started the build manually (not via git update), so hopefully it would work whenever you push something into master... let me know.