Add optional trimmomatic module - Githubissues

mycobactopia-org / MTBseq-nf

MTBSeq made simple and easy using Nextflow and nf-core standard.

https://doi.org/10.5281/zenodo.5498063

MIT License

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Add optional trimmomatic module #46

Closed emilyncosta closed 2 years ago

emilyncosta commented 2 years ago

[x] Add this new module
[x] Add a binary parameter (toggle on the UI) trim_raw_reads
[x] Update the configs files
[x] Update the workflows (adapt the parameter)