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mycobactopia-org / MTBseq-nf

MTBSeq made simple and easy using Nextflow and nf-core standard.
https://doi.org/10.5281/zenodo.5498063
MIT License
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Submit a multi-container image to biocontainers #60

Closed abhi18av closed 1 year ago

abhi18av commented 2 years ago

https://github.com/BioContainers/multi-package-containers/blob/master/combinations/hash.tsv

TODO: Check the correct mtbseq version

bioconda::mtbseq=1.0.3 bioconda/linux-64::gatk=3.8.0 bioconda::fastqc=0.11.9 bioconda::multiqc=1.9
abhi18av commented 2 years ago

The correct script can be sourced from https://github.com/mtb-bioinformatics/mtbseq-nf/pull/64/files

abhi18av commented 1 year ago

This is no longer relevant as we're relying upon Github docker package.