nadeemlab / SPT

Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images (https://oncopathtk.org)
https://oncopathtk.org
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Utility to delete one feature #300

Closed jimmymathews closed 6 months ago

jimmymathews commented 6 months ago

We have done multiple instances of manual deletion of computed features. This is error-prone and takes unnecessary extra time compared with a new CLI command. For this issue add such a command:

spt db delete-feature --specification=<specification identifier> --database-config-file=<db config file>

Let's make it interactive, prompting the user with the specification details before proceeding with the final download. We can also make it prompt for specification number if not supplied.

jimmymathews commented 6 months ago

Implemented.