nadeemlab / SPT

Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images
https://oncopathtk.org
Other
21 stars 2 forks source link

SPT image version isn't pinned #303

Closed CarlinLiao closed 5 months ago

CarlinLiao commented 8 months ago

Current default behavior is to use the latest image tag for the SPT docker image in Singularity and Docker Nextflow workflows, but we observed an issue where Singularity doesn't check for later latest images; so long as you've ever downloaded and cached a latest image, it'll be used, even if it's far from the latest version of latest. To avoid this, we should simply pin the version of the SPT image used, or establish it to be whatever the version of SPT is being used to write the configure command.

CarlinLiao commented 5 months ago

This was closed by #305