nadeemlab / SPT

Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images
https://oncopathtk.org
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Update stats #381

Closed jimmymathews closed 4 days ago

jimmymathews commented 4 days ago

This PR updates the re-analysis results according to recent updates to backend computation libraries. It also includes a few consolidations in the worker/job computation to reduce database connections.

It also fixes a bug caused by a lack of pinned dependency (anndata) by one of our dependencies (squidpy).