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najoshi / sickle

Windowed Adaptive Trimming for fastq files using quality
MIT License
217 stars 95 forks source link

Can't chose window size #42

Open xapple opened 9 years ago

xapple commented 9 years ago

I like the idea of sliding a window along a read to check for a drop in quality, but sickle seems to be missing a crucial option, how can one choose the size of the window ?

tsibley commented 9 years ago

For the record, PR #36 lets you do this.