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nanopore-wgs-consortium / NA12878

Data and analysis for NA12878 genome on nanopore
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FastQ quality #81

Open ymatsumoto opened 4 years ago

ymatsumoto commented 4 years ago

Hi,

At rel6 data set many fastq reads show >30 quality score on average. However, Our basecall results using raw fast5 files showed approximately 13 quality score using guppy 3.4.1.

Why is the quality of fastq reads so high?

Thanks