I wanted to examine m5C and inosine modification on ONT direct RNA sequencing data. However, dorado does not seem to recognise these as valid arguments. Kindly the error log
[2024-11-07 16:53:39.183] [error] Unknown modification variant: 'm5C@v1' - Choices: pseU, m6A_DRACH, m6A, 6mA, 5mC, 5mCG_5hmCG, 5mCG, 5mC_5hmC, 4mC_5mC
[2024-11-07 16:53:39.184] [error] Failed to parse model argument. Failed to parse modified model arguments
Hi,
I wanted to examine m5C and inosine modification on ONT direct RNA sequencing data. However, dorado does not seem to recognise these as valid arguments. Kindly the error log
[2024-11-07 16:53:39.183] [error] Unknown modification variant: 'm5C@v1' - Choices: pseU, m6A_DRACH, m6A, 6mA, 5mC, 5mCG_5hmCG, 5mCG, 5mC_5hmC, 4mC_5mC [2024-11-07 16:53:39.184] [error] Failed to parse model argument. Failed to parse modified model arguments