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nanoporetech / dorado

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Problem building with cmake on an intel macbook pro 2020. #798

Closed ddrazoh closed 5 months ago

ddrazoh commented 6 months ago

I have an intel macbook pro 2020 but have failed to make the dorado build.

ddrazoh commented 6 months ago

I have an intel macbook pro 2020 but have failed to make the dorado build.

Screenshot 2024-05-08 at 12 46 40
HalfPhoton commented 6 months ago

@ddrazoh, You can get dorado pre-built for Mac from the installation documentation. Do you have a specific reason for compiling?

Kind regards, Rich

ddrazoh commented 6 months ago

Dear Richard,

Thank you for reaching out. I was compiling because I have an intel mac but not one with a silcon chip.

Regards, Drake

From: Richard Harris @.> Reply to: nanoporetech/dorado @.> Date: Wednesday, 8 May 2024 at 13:05 To: nanoporetech/dorado @.> Cc: ddrazoh @.>, Mention @.***> Subject: Re: [nanoporetech/dorado] Problem building with cmake on an intel macbook pro 2020. (Issue #798)

@ddrazohhttps://github.com/ddrazoh, You can get dorado pre-built for Mac from the installationhttps://github.com/nanoporetech/dorado?tab=readme-ov-file#installation documentation. Do you have a specific reason for compiling?

Kind regards, Rich

— Reply to this email directly, view it on GitHubhttps://github.com/nanoporetech/dorado/issues/798#issuecomment-2100224691, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AWOOKPA7I3IAVXA3MD4FQKLZBH2H3AVCNFSM6AAAAABHMRZBSWVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDCMBQGIZDINRZGE. You are receiving this because you were mentioned.Message ID: @.***>

ddrazoh commented 6 months ago

Dear Rich, This is the error I get with the pre-buit for mac. I am running an intel macbook pro 2020. Not M1/2 silcon chip. @.***

Thank you.

Drake

From: Richard Harris @.> Reply to: nanoporetech/dorado @.> Date: Wednesday, 8 May 2024 at 13:05 To: nanoporetech/dorado @.> Cc: ddrazoh @.>, Mention @.***> Subject: Re: [nanoporetech/dorado] Problem building with cmake on an intel macbook pro 2020. (Issue #798)

@ddrazohhttps://github.com/ddrazoh, You can get dorado pre-built for Mac from the installationhttps://github.com/nanoporetech/dorado?tab=readme-ov-file#installation documentation. Do you have a specific reason for compiling?

Kind regards, Rich

— Reply to this email directly, view it on GitHubhttps://github.com/nanoporetech/dorado/issues/798#issuecomment-2100224691, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AWOOKPA7I3IAVXA3MD4FQKLZBH2H3AVCNFSM6AAAAABHMRZBSWVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDCMBQGIZDINRZGE. You are receiving this because you were mentioned.Message ID: @.***>

malton-ont commented 6 months ago

Hi @ddrazoh,

This looks like an issue checking out the git submodules, rather than an issue with dorado per se. Try removing the dorado/3rdparty/indicators folder and then run:

git submodule update --init --recursive