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nanoporetech / dorado

Oxford Nanopore's Basecaller
https://nanoporetech.com/
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[question] polishing after read correction #845

Closed JWDebler closed 4 months ago

JWDebler commented 4 months ago

Hi,

now that read correction is available, how should we handle medaka polishing (if at all)? Would we use the uncorrected reads for that? Cheers

tijyojwad commented 4 months ago

Yes medaka polishing should be performed with the original, uncorrected reads.