I am trying to run dorado correct on a Rocky Linux 9.4 Server with an Nvidia H100 and Cuda 12.5 but it does always crash after a few minutes. I tried it on multiple different MinION runs that were basecalled with dorado duplex super high accuracy.
Looking at the error messages it seems to be looking for some nvrtc libraries but apparently in version 11.2. However I have installed them in version 12.5 and can't downgrade. Should I maybe try to compile dorado from source?
I am trying to run dorado correct on a Rocky Linux 9.4 Server with an Nvidia H100 and Cuda 12.5 but it does always crash after a few minutes. I tried it on multiple different MinION runs that were basecalled with dorado duplex super high accuracy. Looking at the error messages it seems to be looking for some nvrtc libraries but apparently in version 11.2. However I have installed them in version 12.5 and can't downgrade. Should I maybe try to compile dorado from source?
Run environment:
dorado correct -v -m ${MODEL_PATH}/herro-v1 -x "cuda:all" 20240402_20-20_01.fastq > 20240402_20-20_01_corrected.fasta
samtools fastq
Logs