Dorado error

[weishwu]

Dorado basecalling crashed with these error messages (full log is attached: 11107-CV-3.dorado_basecall.log):

[2024-06-17 20:22:11.805] [error] Failed to get read 848 signal: Invalid: Input data failed to decompress using zstd: (18446744073709551596 Data corruption detected)
[2024-06-17 20:22:11.805] [error] Failed to get read 849 signal: Invalid: Input data not compressed by zstd: (18446744073709551614 Unspecified error code)
[2024-06-17 20:59:35.347] [error] Failed to get read 973 signal: Invalid: Input data failed to decompress using zstd: (18446744073709551596 Data corruption detected)
[2024-06-17 20:59:35.349] [error] Failed to get read 974 signal: Invalid: Input data not compressed by zstd: (18446744073709551614 Unspecified error code)
[2024-06-17 23:41:13.447] [error] Failed to get read 431 signal: Invalid: Input data failed to decompress using zstd: (18446744073709551596 Data corruption detected)
terminate called without an active exception

Another run is emitting the same "Data corruption" error but is still running, so I'm not sure whether this crash was caused by this error or something else.

Dorado version: 0.7.1

Command-line:

dorado basecaller \
--min-qscore 10 \
sup@v5.0.0,5mCG_5hmCG \
{input.pod5_dir} > {output.bam}

[HalfPhoton]

@weishwu,

Could you please follow the advice in this similar issue and update us with your findings?