nanoporetech / dorado

Oxford Nanopore's Basecaller
https://nanoporetech.com/
Other
439 stars 53 forks source link

Rapid adapter trimming #904

Open diego-rt opened 1 week ago

diego-rt commented 1 week ago

Hey guys,

In version v0.6.2, rapid adapter trimming was apparently turned off according to the release notes.

Has this been re-enabled in the latest v0.7 releases? Apparently II have around 10% adapters (as assessed by cutadapt) in my ULK114 data after running dorado trim and I'm wondering whether it is because of that?

Many thanks!

HalfPhoton commented 6 days ago

Rapid adapter trimming has not been re-enabled yet.