I enjoy Dorado and its' poly(A) features. I started to use them frequently, thus I have some suggestions. I think it would be great if you would be able to provide additional features, especially given that the nanopolish does not work for R004 chemistry.
Please consider the following:
1) providing the positional indices (start-end) of poly(A) tail within the signal
2) quality tag for poly(A) tail prediction (something similar to nanopolish qc tags).
The following would be great for downstream applications.
Dear Nanopore Team,
I enjoy Dorado and its' poly(A) features. I started to use them frequently, thus I have some suggestions. I think it would be great if you would be able to provide additional features, especially given that the nanopolish does not work for R004 chemistry.
Please consider the following: 1) providing the positional indices (start-end) of poly(A) tail within the signal 2) quality tag for poly(A) tail prediction (something similar to nanopolish qc tags).
The following would be great for downstream applications.
Best, N.