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nanoporetech / medaka

Sequence correction provided by ONT Research
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failed call to cuInit: CUDA_ERROR_UNKNOWN: unknown error #431

Closed XW26 closed 1 year ago

XW26 commented 1 year ago

This error message in Bold shows up during 'medaka_consensus':

Running medaka consensus [13:19:50 - Predict] Setting tensorflow inter/intra-op threads to 1/1. [13:19:50 - Predict] Processing region(s): contig_1:0-3201506 contig_2:0-113281 [13:19:50 - Predict] Using model: /home/microlab/anaconda3/envs/medaka/lib/python3.8/site-packages/medaka/data/r941_min_sup_g507_model.tar.gz. 2023-04-03 13:19:50.721925: E tensorflow/stream_executor/cuda/cuda_driver.cc:271] failed call to cuInit: CUDA_ERROR_UNKNOWN: unknown error [13:19:50 - Predict] Processing 5 long region(s) with batching. [13:19:51 - MdlStrTF] Model <keras.engine.sequential.Sequential object at 0x7f6002557fd0> [13:19:51 - MdlStrTF] loading weights from /tmp/tmpjfz9ivgp/model/variables/variables [13:19:51 - BAMFile] Creating pool of 16 BAM file sets.

It seems the error does not affect the final result, I still get my consensus.fasta, just wondering why and if it compromise the final quality?

cjw85 commented 1 year ago

Duplicate of https://github.com/nanoporetech/medaka/issues/430