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Cannot import pyabpoa, some features may not be available. medaka 1.9.0 #451

Closed nextgenusfs closed 10 months ago

nextgenusfs commented 10 months ago

Just noticed this after updating to latest:

$ medaka --version
Cannot import pyabpoa, some features may not be available.
medaka 1.9.0

So it seems pyabpoa is missing from requirements.txt.

cjw85 commented 10 months ago

The message is a warning. It is deliberate as pyabpoa is not yet available on PyPI for all architectures that medaka supports.

If you are running on x86 Linux you can install pyabpoa to avoid the message appearing.