Trying to install medaka on macOS with pip.

nanoporetech / medaka

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Trying to install medaka on macOS with pip. #457

Closed cjw85 closed 9 months ago

cjw85 commented 10 months ago

I am also trying to install medaka on macOS with pip. After the command:

pip install medaka

I get the error: clang-16: error: unsupported argument 'haswell' to option '-mtune='

Originally posted by @srnarum in https://github.com/nanoporetech/medaka/issues/373#issuecomment-1496563440

cjw85 commented 10 months ago

Both the Makefile and the build.py file identify the processor architecture on which the installation is running.

I believe what is happening is that your MacOS device appears to believe it is a x86 device when in fact an M1/M2 ARM-based Apple computer. Have you applied hacks to make your shell or Python environment believe it is running on x86 hardware?

cjw85 commented 9 months ago

Closing through lack of response.