I installed fresh today using conda and found that the installed samtools (1.18) was missing a dependency and making medaka complain about it.
you can see if you have the issue by running this
$ samtools --version
samtools: /opt/miniconda3/envs/medaka/bin/../lib/libtinfow.so.6: no version information available (required by samtools)
samtools: /opt/miniconda3/envs/medaka/bin/../lib/libncursesw.so.6: no version information available (required by samtools)
samtools: /opt/miniconda3/envs/medaka/bin/../lib/libncursesw.so.6: no version information available (required by samtools)
if you have the message you can easily fix the issue by installing ncurses with
v1.11.1
I installed fresh today using conda and found that the installed samtools (1.18) was missing a dependency and making medaka complain about it.
you can see if you have the issue by running this
if you have the message you can easily fix the issue by installing ncurses with