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nanoporetech / ont-assembly-polish

ONT assembly and Illumina polishing pipeline
Mozilla Public License 2.0
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Run without docker #16

Closed BertBog closed 6 years ago

BertBog commented 6 years ago

Dear,

Is it possible to run the pipeline without using docker? I can install dependencies etc manually, but prefer not to use docker.

Best regards, Bert

bsipos commented 6 years ago

Hello,

It is possible to run the pipeline without docker, just make sure you have installed all the dependencies (https://github.com/nanoporetech/ont-assembly-polish#application-dependencies).

Regards, Botond