Closed martynakgajos closed 5 years ago
It's a percent, so it is 1%.
And what does this parameter mean? What is it responsible for?
It filters out isoforms with less that this percent of coverage at a "locus" (a group of transcripts starting roughly at the same position). Safe to set it to zero if worried about confusing your results.
@bsipos Could you please provide a recommended value for this parameter when annotating a genome using ONT cDNA data?
Thanks!
What is the minimum isoform percentage parameter? And what does the value 1 mean: 1 as 1.0 (so 100%) or 1 as 1%?