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nanoporetech / pinfish

Tools to annotate genomes using long read transcriptomics data
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question on cluster_gff #17

Closed ljw90607 closed 4 years ago

ljw90607 commented 4 years ago

Dear @bsipos

Hello while I was doing the analysis, I ran into some question on the cluster_gff step. Would the cluster_gff step consider to print out the 2 different stranded cluster reads seperately as output when they happened to have matching boundary?

Thank you for your wonderful help.

Jungwoo.

bsipos commented 4 years ago

Dear Jungwoo,

Yes, the current version of cluster_gff would do exactly that.

Botond