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nanoporetech / pinfish

Tools to annotate genomes using long read transcriptomics data
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pinfish - amplicon clustering #22

Closed anitagh closed 4 years ago

anitagh commented 4 years ago

I'm interested in using pinfish for non-reference amplicon clustering. Is it possible?

Many Thanks, Azita

bsipos commented 4 years ago

No, pinfish is not built for that. But you might find this useful: https://github.com/ksahlin/NGSpeciesID