DTU transcript.tsv contains adjusted p.values?

nanoporetech / pipeline-transcriptome-de

Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

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DTU transcript.tsv contains adjusted p.values? #29

Open callumparr opened 3 years ago

callumparr commented 3 years ago

Is the output DTU transcript.tsv file the p.values or adjusted p.values? Is there a standard threshold to apply for statistically significant DTU entries?