"intersect_assembly_errors" program runs too long a time without a finish

nanoporetech / pomoxis

Analysis components from Oxford Nanopore Research

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Open yipukangda opened 4 years ago

yipukangda commented 4 years ago

I want to compare assembly results from three assembly tools

I concat three assembly fasta to one;
running intersect_assembly_errors with cmd
```
intersect_assembly_errors -r ref.fasta -i ./all_assm.fa
```
but it is still running after more than 3 hour.

Is there something wrong with the process?