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nanoporetech / pomoxis

Analysis components from Oxford Nanopore Research
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where should i clone pomoxis? #8

Closed barak2 closed 6 years ago

barak2 commented 6 years ago

I have created python3 environment and activated it. I entered its path and tried to clone and install pomoxis:

~/environments/Python3_env/pomoxis and got this error:

test -d venv || virtualenv venv --python=python3 /bin/sh: 1: virtualenv: not found Makefile:54: recipe for target 'venv/bin/activate' failed make: *** [venv/bin/activate] Error 127

I guess i have cloned it to the wrong place, but i didn't where did you want it to be. thanks.

cjw85 commented 6 years ago

Hi @barak2 The above looks like you are attempting to run the Makefile from within a virtual environment. This isn't necessary as running make will create a fresh environment (and is likely the source of the error: virtualenv the program is not available within the environment you have created beforehand).

Could you please try following the instructions provided here, outside of any special environment?