nanoporetech / pore-c

Pore-C support
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tie breaking #21

Closed proinde closed 4 years ago

proinde commented 5 years ago

https://github.com/nanoporetech/pore-c/blob/6544a1b1ed464477fcda1b5db6b4dc38d35194b7/src/pore_c/tools/cluster_reads.py#L29

Currently, if there are two alignments with identical start and stop positions, the code will not remove either as it is currently written. Have to decide what the right resolution of this conflict should be.