HMMER not compatible with pychopper v2

nanoporetech / pychopper

A tool to identify, orient, trim and rescue full length cDNA reads

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Closed bressin closed 4 years ago

bressin commented 4 years ago

Comment on the README:

conda install -c bioconda "hmmer>=3.0"

hmmer version >= 3.0 is not sufficient for pychopper v2, at least with v3.1 I had problems.

With the latest version (v3.3.) it works now.

bsipos commented 4 years ago

Thanks for reporting this! I will update the dependencies.