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nanoporetech / pychopper

A tool to identify, orient, trim and rescue full length cDNA reads
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Unable to make test #36

Closed JoshLoecker closed 4 years ago

JoshLoecker commented 4 years ago

I've installed pychopper into a virtual environment in Pycharm, but I can't seem to figure out how to run make tests. Below is what I've tried to run

cd ~/PycharmProjects/MyProject/venv/lib/python3.6/site-packages/pychopper

make test

make: *** No rule to make target 'test'. Stop.

I'm not sure what I'm doing wrong. If my understanding is correct, Pychopper is built on python 2.7 (I think?), but my virtual environment is running on Python 3.6. Do I need to downgrade my environment to python 2.7?

I appreciate any help!

JoshLoecker commented 4 years ago

I've solved my issue by first running git clone https://github.com/nanoporetech/pychopper.git"