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nanoporetech
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scrappie
Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group
Mozilla Public License 2.0
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Which version is "squiggle_r10" referring to?
#48
adrianvidal
opened
2 years ago
1
Expose events detection in scrappie
#47
loganylchen
closed
2 years ago
1
Events detection through Python
#46
loganylchen
opened
2 years ago
0
log in Squiggle format
#45
loganylchen
closed
3 years ago
2
Fix spelling (gotya -> gotcha)
#44
sebastian-burlacu
closed
2 years ago
0
CLARIFICATION: event detection for RNA
#43
harisankarsadasivan
opened
3 years ago
0
CLARIFICATION: event detector params
#42
harisankarsadasivan
closed
3 years ago
6
Masking Event Detection
#41
vickymzheng
closed
3 years ago
1
Squiggle Current Output
#40
vickymzheng
opened
3 years ago
1
Clarification on Parameter 'dwell' in Squiggle Output
#39
VidurangaWijekoon
closed
4 years ago
2
Unable to find binary when building scrappie using docker ubuntu 18.04
#38
madagiurgiu25
closed
4 years ago
2
Correct sequence direction to use RNA model?
#37
youyupei
closed
4 years ago
1
scrappie squiggle & IUPAC bases
#36
splaisan
closed
4 years ago
12
Model differences
#35
Psy-Fer
opened
5 years ago
0
Update pypi wheels
#34
cjw85
closed
5 years ago
2
What is the purpose of the `with h5py.File()... : pass` lines
#33
Shians
closed
5 years ago
1
Is the scrappy.sequence_to_squiggle in python package serve the same purpose with scrappie squiggle?
#32
youyupei
closed
5 years ago
5
Failed find read name under /Raw/Reads/.
#31
xinwang-bio
closed
4 years ago
1
`make` produces an error based around `src/networks.c`
#30
shaniAmare
closed
5 years ago
4
RNA model?
#29
JMiguelRamirez
closed
5 years ago
9
Undefined reference when installing
#28
JMiguelRamirez
closed
5 years ago
3
cannot install scrappie python binding on macOS
#27
alexomics
closed
4 years ago
2
Fastq output?
#26
rybern
closed
5 years ago
1
Scrappie squiggle normalised current to pA
#25
shubhamchandak94
closed
5 years ago
1
Scrappie unittests fail
#24
ccoulombe
closed
5 years ago
8
HDF5 error
#23
pjgmale
closed
5 years ago
4
Include alternate directory options for OpenBLAS and HDF5
#22
aaronk
closed
5 years ago
1
Separate subcommands from description.
#21
EQt
closed
5 years ago
1
WIP: Update .travis.yml
#20
myrtlecat
closed
6 years ago
1
scrappie: error while loading shared libraries: libopenblas.so.0: cannot open shared object file: No such file or directory
#19
egeogretmen
closed
6 years ago
5
Processing of a whole folder
#18
phpeters
closed
6 years ago
4
ke
#17
phpeters
closed
6 years ago
0
Homopolymer Accuracy Scrappie vs. Albacore
#16
damientully
closed
6 years ago
1
about dwell in squiggle output
#15
Angelven
closed
6 years ago
4
Memory leak?
#14
ragak
closed
5 years ago
6
Trouble compiling on macOSX
#13
ragak
closed
6 years ago
3
Installation problem on CentOS 6.5
#12
ernestopicardi
closed
6 years ago
1
How to test my Scrappie
#11
Angelven
closed
6 years ago
12
OpenSUSE Leap 42.3
#10
avierstr
closed
6 years ago
3
Pore model for scrappie squiggle?
#9
rrwick
closed
6 years ago
2
HDF5 version/linking problem?
#8
fnollet
closed
6 years ago
3
Use newline when printing version.
#7
jvhaarst
closed
6 years ago
1
remove unnecessary include
#6
jts
closed
7 years ago
2
Problem building on Ubuntu 12.04
#5
rrwick
closed
7 years ago
1
Installation error
#4
wyzhangMPI
closed
7 years ago
5
Compilation problems on a computer with AMD processor
#3
svkazakov
closed
7 years ago
7
Could Albacore input be used for scrappie?
#2
nickloman
closed
7 years ago
3
Feature request: use scrappie as a library
#1
jts
closed
7 years ago
5