nanxstats protr issues - Githubissues

nanxstats / protr

🧬 Toolkit for generating various numerical features of protein sequences

https://nanx.me/protr/

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Use standard staticimports workflow

#59 nanxstats opened 2 months ago
0
Update news for v1.7-4

#58 nanxstats closed 2 months ago
0
Release protr 1.7-4

#57 nanxstats closed 2 months ago
1
Resolve `pairwiseAlignment()` early and consistently

#56 nanxstats closed 2 months ago
0
Update news for v1.7-3

#55 nanxstats closed 2 months ago
0
Determine `pairwiseAlignment()` call source based on Biostrings version

#54 nanxstats closed 2 months ago
0
Release protr 1.7-3

#53 nanxstats closed 2 months ago
1
`pairwiseAlignment()` moved to pwalign warning in Biostrings >= 2.72.0

#52 ecrespoSSF closed 2 months ago
3
Update news for v1.7-2

#51 nanxstats closed 4 months ago
0
Improve vignette text and accessibility

#50 nanxstats closed 4 months ago
0
Add `key` to `inst/CITATION`

#49 nanxstats closed 4 months ago
0
Release protr 1.7-2

#48 nanxstats closed 4 months ago
1
Improve code and documentation style

#47 nanxstats closed 4 months ago
0
Fix alt text for vignette images

#46 nanxstats closed 4 months ago
0
Add citation key

#45 nanxstats closed 4 months ago
0
New Protein Descriptor: Symmetric extractDC

#44 discoleo opened 7 months ago
1
Update news for protr 1.7-1

#43 nanxstats closed 7 months ago
0
Release protr 1.7-1

#42 nanxstats closed 7 months ago
1
Add batch and disk offloading for cross set similarity computation

#41 nanxstats closed 7 months ago
0
Improve dotfiles

#40 nanxstats closed 7 months ago
0
Style improvements

#39 nanxstats closed 7 months ago
0
crossSetSim() function

#38 ofleitas closed 7 months ago
2
doubt about crossSetSim()

#37 ofleitas closed 9 months ago
4
Release protr 1.7-0

#36 nanxstats closed 1 year ago
1
implemented pairwise protlist function (fixes #34)

#35 seb-mueller closed 1 year ago
0
Efficient way to compare 2 sets of multiple sequences

#34 seb-mueller closed 1 year ago
4
Release protr 1.6-3

#33 nanxstats closed 1 year ago
1
Can't read FASTA sequences in the R package

#32 rohitfarmer closed 2 years ago
3
Add comment about system.file

#31 jonalv closed 3 years ago
1
Fixed minor bug in extractProtFP/extractProtFPGap when index = NULL

#30 fcampelo closed 3 years ago
2
issue while using protrweb

#29 sidrahmaryam opened 4 years ago
1
not able to read FASTA file using Protr package

#28 arjunpuri7 closed 4 years ago
1
Question about "Sequence-order-coupling number"

#27 psychemistz opened 4 years ago
0
extractMoreauBroto

#26 VeenaPulicharla closed 5 years ago
1
Problems with CTDClasses failing

#25 celiosantosjr opened 5 years ago
1
error when running parGOSim()

#24 deniseduma closed 5 years ago
2
error reading FASTA files

#23 kbarylyuk closed 6 years ago
5
sequence encoding feature

#22 arronlacey closed 6 years ago
3
extractMoran results are (1) longer than documentation claims (2) inconveniently structured

#21 malcook closed 6 years ago
0
extractCTDT: Return correct results when a transition has a count of zero

#20 koefoed closed 8 years ago
0
extractCTDT returns wrong results when a transition has a count of zero

#19 koefoed closed 8 years ago
0
extractAPAAC: stop with an error if the sequence is not longer than lambda

#18 koefoed closed 8 years ago
0
extractAPAAC fails when the length of the sequence is not greater than lambda

#17 koefoed closed 8 years ago
0
extractPAAC: stop with an error if the sequence is not longer than lambda

#16 koefoed closed 8 years ago
0
extractPAAC fails when the length of the sequence is not greater than lambda

#15 koefoed closed 8 years ago
0
extractQSO: Also stop with an error if the length of the sequence is equal to nlag

#14 koefoed closed 8 years ago
0
extractQSO fails when the length of the sequence is equal to nlag

#13 koefoed closed 8 years ago
0
extractSOCN: Also stop with an error if the length of the sequence is equal to nlag

#12 koefoed closed 8 years ago
0
extractSOCN fails when the length of the sequence is equal to nlag

#11 koefoed closed 8 years ago
0
extractCTDD fails when less than four amino acids maps to any one group

#10 koefoed closed 8 years ago
3