naobservatory / p2ra

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Compare prevalence/incidence estimates with MGS data #125

Closed dp-rice closed 1 year ago

dp-rice commented 1 year ago

Not sure whether this should be merged into main, but could be useful for discussion:

Added data_comparison.py, which generates estimate_table.tsv, which says whether we have an incidence/prevalence estimate for each RNA virus for each MGS sampling time/location in Rothman, Crits-Christoph, and Spurbeck.

jeffkaufman commented 1 year ago

Superseded by #133