We currently only look at rna_pathogens because we only have rna data (that we like) but some dna pathogens are in the data. Switch from rna_pathogens to focal_pathogens. Initially include all the ones that pass tests, then try adding others we do want to use and make them pass tests.
We currently only look at
rna_pathogensbecause we only have rna data (that we like) but some dna pathogens are in the data. Switch fromrna_pathogenstofocal_pathogens. Initially include all the ones that pass tests, then try adding others we do want to use and make them pass tests.