naobservatory / p2ra

4 stars 1 forks source link

Fit brinch #207

Closed dp-rice closed 1 year ago

dp-rice commented 1 year ago

Fit the model to the Brinch data (as well as any changes that have been made to the pathogen files since the June all-hands memo).

Model fit: overall-boxen

Matching reads table: matching-reads-table

Note that this partially breaks plot_summaries.py but this will be revised significantly soon to improve the figures.