Closed jeffkaufman closed 1 year ago
Example output:
taxid filename human_readable 10298 hsv_1 HSV-1 10310 hsv_2 HSV-2 10359 cmv CMV 10376 ebv EBV 10407 hbv HBV 10566 hpv HPV 10632 jcv JCV 10804 aav2 AAV2 11103 hcv HCV 11320 influenza Influenza A 11520 influenza Influenza B 11676 hiv HIV 68558 aav6 AAV6 82300 aav5 AAV5 122928 norovirus Norovirus (GI) 122929 norovirus Norovirus (GII) 493803 mcv MCV 1891762 bkv BKV 2697049 sars_cov_2 SARS-COV-2
I realized I needed this in trying to check that all of our taxids are recognizeable by Kraken, because there wasn't previously an easy way to get the taxids.
Example output:
I realized I needed this in trying to check that all of our taxids are recognizeable by Kraken, because there wasn't previously an easy way to get the taxids.