nasa / ncompare

Compare the structure of two netCDF files at the command line
https://ncompare.readthedocs.io
Apache License 2.0
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Bump the pip-dependencies group with 7 updates #251

Closed dependabot[bot] closed 3 months ago

dependabot[bot] commented 3 months ago

Bumps the pip-dependencies group with 7 updates:

Package From To
numpy 2.0.0 2.0.1
xarray 2024.6.0 2024.7.0
pytest 8.2.2 8.3.2
ruff 0.5.1 0.5.5
mypy 1.10.1 1.11.1
mkdocstrings 0.25.1 0.25.2
mkdocs-material 9.5.28 9.5.30

Updates numpy from 2.0.0 to 2.0.1

Release notes

Sourced from numpy's releases.

v2.0.1

NumPy 2.0.1 Release Notes

NumPy 2.0.1 is a maintenance release that fixes bugs and regressions discovered after the 2.0.0 release. NumPy 2.0.1 is the last planned release in the 2.0.x series, 2.1.0rc1 should be out shortly.

The Python versions supported by this release are 3.9-3.12.

NOTE: Do not use the GitHub generated "Source code" files listed in the "Assets", they are garbage.

Improvements

np.quantile with method closest_observation chooses nearest even order statistic

This changes the definition of nearest for border cases from the nearest odd order statistic to nearest even order statistic. The numpy implementation now matches other reference implementations.

(gh-26656)

Contributors

A total of 15 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • @​vahidmech +
  • Alex Herbert +
  • Charles Harris
  • Giovanni Del Monte +
  • Leo Singer
  • Lysandros Nikolaou
  • Matti Picus
  • Nathan Goldbaum
  • Patrick J. Roddy +
  • Raghuveer Devulapalli
  • Ralf Gommers
  • Rostan Tabet +
  • Sebastian Berg
  • Tyler Reddy
  • Yannik Wicke +

Pull requests merged

A total of 24 pull requests were merged for this release.

  • #26711: MAINT: prepare 2.0.x for further development
  • #26792: TYP: fix incorrect import in ma/extras.pyi stub
  • #26793: DOC: Mention '1.25' legacy printing mode in set_printoptions
  • #26794: DOC: Remove mention of NaN and NAN aliases from constants

... (truncated)

Commits
  • 4c9f431 Merge pull request #27000 from charris/prepare-2.0.1
  • 0e70e00 REL: Prepare for the NumPy 2.0.1 release [wheel build]
  • 4d10ffc Merge pull request #26995 from charris/backport-26985
  • 764b667 BUG: Add object cast to avoid warning with limited API
  • 9be6ad6 Merge pull request #26971 from charris/backport-26935
  • 6d950e9 BUG: fix f2py tests to work with v2 API
  • 89630c0 Merge pull request #26962 from charris/backport-26919
  • 88fa840 TST: Apply test suggestion by Nathan for rlstrip fixes
  • a9da01e BUG,MAINT: Fix utf-8 character stripping memory access
  • 6afbbf8 Merge pull request #26963 from charris/backport-26930
  • Additional commits viewable in compare view


Updates xarray from 2024.6.0 to 2024.7.0

Release notes

Sourced from xarray's releases.

v2024.07.0

This release extends the API for groupby operations with various grouper objects, and includes improvements to the documentation and numerous bugfixes.

Thanks to the 22 contributors to this release: Alfonso Ladino, ChrisCleaner, David Hoese, Deepak Cherian, Dieter Werthmüller, Illviljan, Jessica Scheick, Joel Jaeschke, Justus Magin, K. Arthur Endsley, Kai Mühlbauer, Mark Harfouche, Martin Raspaud, Mathijs Verhaegh, Maximilian Roos, Michael Niklas, Michał Górny, Moritz Schreiber, Pontus Lurcock, Spencer Clark, Stephan Hoyer and Tom Nicholas

What's Changed

... (truncated)

Commits


Updates pytest from 8.2.2 to 8.3.2

Release notes

Sourced from pytest's releases.

8.3.2

pytest 8.3.2 (2024-07-24)

Bug fixes

  • #12652: Resolve regression [conda]{.title-ref} environments where no longer being automatically detected.

    -- by RonnyPfannschmidt{.interpreted-text role="user"}

8.3.1

pytest 8.3.1 (2024-07-20)

The 8.3.0 release failed to include the change notes and docs for the release. This patch release remedies this. There are no other changes.

8.3.0

pytest 8.3.0 (2024-07-20)

New features

  • #12231: Added [--xfail-tb]{.title-ref} flag, which turns on traceback output for XFAIL results.

    • If the [--xfail-tb]{.title-ref} flag is not given, tracebacks for XFAIL results are NOT shown.
    • The style of traceback for XFAIL is set with [--tb]{.title-ref}, and can be [auto|long|short|line|native|no]{.title-ref}.
    • Note: Even if you have [--xfail-tb]{.title-ref} set, you won't see them if [--tb=no]{.title-ref}.

    Some history:

    With pytest 8.0, [-rx]{.title-ref} or [-ra]{.title-ref} would not only turn on summary reports for xfail, but also report the tracebacks for xfail results. This caused issues with some projects that utilize xfail, but don't want to see all of the xfail tracebacks.

    This change detaches xfail tracebacks from [-rx]{.title-ref}, and now we turn on xfail tracebacks with [--xfail-tb]{.title-ref}. With this, the default [-rx]{.title-ref}/ [-ra]{.title-ref} behavior is identical to pre-8.0 with respect to xfail tracebacks. While this is a behavior change, it brings default behavior back to pre-8.0.0 behavior, which ultimately was considered the better course of action.

  • #12281: Added support for keyword matching in marker expressions.

    Now tests can be selected by marker keyword arguments. Supported values are int{.interpreted-text role="class"}, (unescaped) str{.interpreted-text role="class"}, bool{.interpreted-text role="class"} & None{.interpreted-text role="data"}.

    See marker examples <marker_keyword_expression_example>{.interpreted-text role="ref"} for more information.

    -- by lovetheguitar{.interpreted-text role="user"}

  • #12567: Added --no-fold-skipped command line option.

    If this option is set, then skipped tests in short summary are no longer grouped by reason but all tests are printed individually with their nodeid in the same way as other statuses.

    -- by pbrezina{.interpreted-text role="user"}

... (truncated)

Commits
  • bbcec9c Prepare release version 8.3.2
  • 78fe8b6 Merge pull request #12657 from pytest-dev/patchback/backports/8.3.x/6c806b499...
  • 238bad2 Merge pull request #12656 from RonnyPfannschmidt/fix-12652-detect-conda-env
  • ae6034a Merge pull request #12641 from pytest-dev/patchback/backports/8.3.x/c03989cee...
  • 31337ab Merge pull request #12640 from pytest-dev/update-user
  • ca3070b Merge pull request #12637 from pytest-dev/release-8.3.1
  • de98446 Prepare release version 8.3.1
  • bd0a042 Merge pull request #12636 from pytest-dev/update-release-notes
  • 664325b doc/changelog: update 8.3.0 notes
  • 19d225d Merge pull request #12635 from pytest-dev/release-8.3.0
  • Additional commits viewable in compare view


Updates ruff from 0.5.1 to 0.5.5

Release notes

Sourced from ruff's releases.

0.5.5

Release Notes

Preview features

  • [fastapi] Implement fastapi-redundant-response-model (FAST001) and fastapi-non-annotated-dependency(FAST002) (#11579)
  • [pydoclint] Implement docstring-missing-exception (DOC501) and docstring-extraneous-exception (DOC502) (#11471)

Rule changes

  • [numpy] Fix NumPy 2.0 rule for np.alltrue and np.sometrue (#12473)
  • [numpy] Ignore NPY201 inside except blocks for compatibility with older numpy versions (#12490)
  • [pep8-naming] Avoid applying ignore-names to self and cls function names (N804, N805) (#12497)

Formatter

  • Fix incorrect placement of leading function comment with type params (#12447)

Server

  • Do not bail code action resolution when a quick fix is requested (#12462)

Bug fixes

  • Fix Ord implementation of cmp_fix (#12471)
  • Raise syntax error for unparenthesized generator expression in multi-argument call (#12445)
  • [pydoclint] Fix panic in DOC501 reported in #12428 (#12435)
  • [flake8-bugbear] Allow singleton tuples with starred expressions in B013 (#12484)

Documentation

  • Add Eglot setup guide for Emacs editor (#12426)
  • Add note about the breaking change in nvim-lspconfig (#12507)
  • Add note to include notebook files for native server (#12449)
  • Add setup docs for Zed editor (#12501)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.5.5

Preview features

  • [fastapi] Implement fastapi-redundant-response-model (FAST001) and fastapi-non-annotated-dependency(FAST002) (#11579)
  • [pydoclint] Implement docstring-missing-exception (DOC501) and docstring-extraneous-exception (DOC502) (#11471)

Rule changes

  • [numpy] Fix NumPy 2.0 rule for np.alltrue and np.sometrue (#12473)
  • [numpy] Ignore NPY201 inside except blocks for compatibility with older numpy versions (#12490)
  • [pep8-naming] Avoid applying ignore-names to self and cls function names (N804, N805) (#12497)

Formatter

  • Fix incorrect placement of leading function comment with type params (#12447)

Server

  • Do not bail code action resolution when a quick fix is requested (#12462)

Bug fixes

  • Fix Ord implementation of cmp_fix (#12471)
  • Raise syntax error for unparenthesized generator expression in multi-argument call (#12445)
  • [pydoclint] Fix panic in DOC501 reported in #12428 (#12435)
  • [flake8-bugbear] Allow singleton tuples with starred expressions in B013 (#12484)

Documentation

  • Add Eglot setup guide for Emacs editor (#12426)
  • Add note about the breaking change in nvim-lspconfig (#12507)
  • Add note to include notebook files for native server (#12449)
  • Add setup docs for Zed editor (#12501)

0.5.4

Rule changes

  • [ruff] Rename RUF007 to zip-instead-of-pairwise (#12399)

Bug fixes

  • [flake8-builtins] Avoid shadowing diagnostics for @override methods (#12415)
  • [flake8-comprehensions] Insert parentheses for multi-argument generators (#12422)
  • [pydocstyle] Handle escaped docstrings within docstring (D301) (#12192)

Documentation

  • Fix GitHub link to Neovim setup (#12410)

... (truncated)

Commits
  • fc16d8d Bump version to 0.5.5 (#12510)
  • 175e5d7 Add missing traceback line in f-string-in-exception docstring. (#12508)
  • c03f257 Add note about the breaking change in nvim-lspconfig (#12507)
  • 6bbb4a2 Add setup docs for Zed editor (#12501)
  • 2ce3e3a Fix the search path tests on MacOS (#12503)
  • 2a64ccc Avoid applying ignore-names to self and cls function names (#12497)
  • 928ffd6 Ignore NPY201 inside except blocks for compatibility with older numpy ver...
  • e52be09 [red-knot] Improve validation for search paths (#12376)
  • 8890735 [flake8-bugbear] Allow singleton tuples with starred expressions in B013 (#12...
  • eac965e [red-knot] Watch search paths (#12407)
  • Additional commits viewable in compare view


Updates mypy from 1.10.1 to 1.11.1

Changelog

Sourced from mypy's changelog.

Mypy Release Notes

Next release

Mypy 1.11

We’ve just uploaded mypy 1.11 to the Python Package Index (PyPI). Mypy is a static type checker for Python. This release includes new features, performance improvements and bug fixes. You can install it as follows:

python3 -m pip install -U mypy

You can read the full documentation for this release on Read the Docs.

Support Python 3.12 Syntax for Generics (PEP 695)

Mypy now supports the new type parameter syntax introduced in Python 3.12 (PEP 695). This feature is still experimental and must be enabled with the --enable-incomplete-feature=NewGenericSyntax flag, or with enable_incomplete_feature = NewGenericSyntax in the mypy configuration file. We plan to enable this by default in the next mypy feature release.

This example demonstrates the new syntax:

# Generic function
def f[T](https://github.com/python/mypy/blob/master/x: T) -> T: ...

reveal_type(f(1)) # Revealed type is 'int'

Generic class

class C[T]: def init(self, x: T) -> None: self.x = x

c = C('a') reveal_type(c.x) # Revealed type is 'str'

Type alias

type A[T] = C[list[T]]

This feature was contributed by Jukka Lehtosalo.

Support for functools.partial

Mypy now type checks uses of functools.partial. Previously mypy would accept arbitrary arguments.

This example will now produce an error:

from functools import partial
</tr></table> 

... (truncated)

Commits


Updates mkdocstrings from 0.25.1 to 0.25.2

Release notes

Sourced from mkdocstrings's releases.

0.25.2

0.25.2 - 2024-07-25

Compare with 0.25.1

Code Refactoring

  • Give precedence to Markdown heading level (##) (2e5f89e by Timothée Mazzucotelli).
Changelog

Sourced from mkdocstrings's changelog.

0.25.2 - 2024-07-25

Compare with 0.25.1

Code Refactoring

  • Give precedence to Markdown heading level (##) (2e5f89e by Timothée Mazzucotelli).
Commits
  • afb2a2f chore: Prepare release 0.25.2
  • e7c8abd tests: Ignore deprecation warnings for now
  • 924ecd8 chore: Template upgrade
  • da216b0 ci: Ignore unused arg
  • 80ab498 chore: Clean up pytest warning filters
  • 2e5f89e refactor: Give precedence to Markdown heading level (##)
  • fb194d8 chore: Clean up get_anchors
  • 64c5ff6 chore: Improve code comments
  • 8013be4 chore: Clean up unused condition
  • See full diff in compare view


Updates mkdocs-material from 9.5.28 to 9.5.30

Release notes

Sourced from mkdocs-material's releases.

mkdocs-material-9.5.30

  • Fixed #7380: Navigation icons disappearing on hover in Safari
  • Fixed #7367: Blog readtime computation includes SVG text content

Thanks go to @​sisp for their contributions

mkdocs-material-9.5.29

  • Updated Galician translations
  • Fixed #7362: Annotations in figure captions rendering incorrectly

Thanks go to @​mmontes11 for their contributions

Changelog

Sourced from mkdocs-material's changelog.

mkdocs-material-9.5.30 (2024-07-23)

  • Fixed #7380: Navigation icons disappearing on hover in Safari
  • Fixed #7367: Blog readtime computation includes SVG text content

mkdocs-material-9.5.29 (2024-07-14)

  • Updated Galician translations
  • Fixed #7362: Annotations in figure captions rendering incorrectly

mkdocs-material-9.5.28 (2024-07-02)

  • Fixed #7313: Improved tooltips mounted in sidebar when feature is disabled

mkdocs-material-9.5.27 (2024-06-16)

  • Updated Estonian translations

mkdocs-material-9.5.26 (2024-06-06)

  • Fixed #7232: Tab switches on scroll when linking tabs (9.5.19 regression)
  • Fixed #7230: Blog author avatar broken when referring to local file

mkdocs-material-9.5.25+insiders-4.53.11 (2024-05-27)

  • Fixed projects plugin crashing when serving before building subprojects

mkdocs-material-9.5.25 (2024-05-27)

  • Fixed #7209: Tags plugin crashing on numeric tags

mkdocs-material-9.5.24+insiders-4.53.10 (2024-05-20)

  • Fixed projects plugin crashing in serve mode when disabled
  • Fixed projects plugin crashing when building nested projects

mkdocs-material-9.5.24+insiders-4.53.9 (2024-05-20)

  • Fixed #7191: Tags listings not rendering when toc_depth is changed

mkdocs-material-9.5.24 (2024-05-20)

  • Fixed #7187: Version selector title rendering issue

mkdocs-material-9.5.23 (2024-05-15)

  • Fixed #7183: Edge case in anchor navigation when using instant navigation
  • Fixed #6436: Version selector not showing version alias

mkdocs-material-9.5.22 (2024-05-12)

... (truncated)

Commits


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📚 Documentation preview 📚: https://ncompare--251.org.readthedocs.build/en/251/