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nasa / ncompare

Compare the structure of two netCDF files at the command line
https://ncompare.readthedocs.io
Apache License 2.0
27 stars 9 forks source link

Bump the pip-dependencies group with 7 updates #252

Closed dependabot[bot] closed 1 month ago

dependabot[bot] commented 2 months ago

Bumps the pip-dependencies group with 7 updates:

Package From To
numpy 2.0.1 2.0.2
netcdf4 1.7.1.post1 1.7.1.post2
ruff 0.5.5 0.6.3
black 24.4.2 24.8.0
mypy 1.11.1 1.11.2
mkdocs 1.6.0 1.6.1
mkdocs-material 9.5.30 9.5.34

Updates numpy from 2.0.1 to 2.0.2

Release notes

Sourced from numpy's releases.

NumPy 2.0.2 release (Aug 26, 2024)

NumPy 2.0.2 Release Notes

NumPy 2.0.2 is a maintenance release that fixes bugs and regressions discovered after the 2.0.1 release.

The Python versions supported by this release are 3.9-3.12.

Contributors

A total of 13 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Bruno Oliveira +
  • Charles Harris
  • Chris Sidebottom
  • Christian Heimes +
  • Christopher Sidebottom
  • Mateusz Sokół
  • Matti Picus
  • Nathan Goldbaum
  • Pieter Eendebak
  • Raghuveer Devulapalli
  • Ralf Gommers
  • Sebastian Berg
  • Yair Chuchem +

Pull requests merged

A total of 19 pull requests were merged for this release.

  • #27000: REL: Prepare for the NumPy 2.0.1 release [wheel build]
  • #27001: MAINT: prepare 2.0.x for further development
  • #27021: BUG: cfuncs.py: fix crash when sys.stderr is not available
  • #27022: DOC: Fix migration note for alltrue and sometrue
  • #27061: BUG: use proper input and output descriptor in array_assign_subscript...
  • #27073: BUG: Mirror VQSORT_ENABLED logic in Quicksort
  • #27074: BUG: Bump Highway to latest master
  • #27077: BUG: Off by one in memory overlap check
  • #27122: BUG: Use the new npyv_loadable_stride_ functions for ldexp and...
  • #27126: BUG: Bump Highway to latest
  • #27128: BUG: add missing error handling in public_dtype_api.c
  • #27129: BUG: fix another cast setup in array_assign_subscript
  • #27130: BUG: Fix building NumPy in FIPS mode
  • #27131: BLD: update vendored Meson for cross-compilation patches
  • #27146: MAINT: Scipy openblas 0.3.27.44.4
  • #27151: BUG: Do not accidentally store dtype metadata in np.save
  • #27195: REV: Revert undef I and document it
  • #27213: BUG: Fix NPY_RAVEL_AXIS on backwards compatible NumPy 2 builds
  • #27279: BUG: Fix array_equal for numeric and non-numeric scalar types

... (truncated)

Commits
  • 854252d Merge pull request #27280 from charris/prepare-2.0.2
  • cffa071 REL: Prepare for the NumPy 2.0.2 release [wheel build]
  • 1693029 Merge pull request #27279 from charris/backport-27275
  • da9f9c3 BUG: Fix array_equal for numeric and non-numeric scalar types
  • ee1cf96 Merge pull request #27213 from charris/backport-27202
  • 49dec35 BUG: Fix NPY_RAVEL_AXIS on backwards compatible NumPy 2 builds
  • be56ae2 Merge pull request #27195 from charris/backport-27182
  • 75b039c REV: Revert undef I and document it
  • 428e2ba Merge pull request #27151 from charris/backport-27143
  • 451516d BUG: Do not accidentally store dtype metadata in np.save
  • Additional commits viewable in compare view


Updates netcdf4 from 1.7.1.post1 to 1.7.1.post2

Commits


Updates ruff from 0.5.5 to 0.6.3

Release notes

Sourced from ruff's releases.

0.6.3

Release Notes

Preview features

  • [flake8-simplify] Extend open-file-with-context-handler to work with dbm.sqlite3 (SIM115) (#13104)
  • [pycodestyle] Disable E741 in stub files (.pyi) (#13119)
  • [pydoclint] Avoid DOC201 on explicit returns in functions that only return None (#13064)

Rule changes

  • [flake8-async] Disable check for asyncio before Python 3.11 (ASYNC109) (#13023)

Bug fixes

  • [FastAPI] Avoid introducing invalid syntax in fix for fast-api-non-annotated-dependency (FAST002) (#13133)
  • [flake8-implicit-str-concat] Normalize octals before merging concatenated strings in single-line-implicit-string-concatenation (ISC001) (#13118)
  • [flake8-pytest-style] Improve help message for pytest-incorrect-mark-parentheses-style (PT023) (#13092)
  • [pylint] Avoid autofix for calls that aren't min or max as starred expression (PLW3301) (#13089)
  • [ruff] Add datetime.time, datetime.tzinfo, and datetime.timezone as immutable function calls (RUF009) (#13109)
  • [ruff] Extend comment deletion for RUF100 to include trailing text from noqa directives while preserving any following comments on the same line, if any (#13105)
  • Fix dark theme on initial page load for the Ruff playground (#13077)

Contributors

Install ruff 0.6.3

Install prebuilt binaries via shell script

curl --proto '=https' --tlsv1.2 -LsSf https://github.com/astral-sh/ruff/releases/download/0.6.3/ruff-installer.sh | sh

Install prebuilt binaries via powershell script

... (truncated)

Changelog

Sourced from ruff's changelog.

0.6.3

Preview features

  • [flake8-simplify] Extend open-file-with-context-handler to work with dbm.sqlite3 (SIM115) (#13104)
  • [pycodestyle] Disable E741 in stub files (.pyi) (#13119)
  • [pydoclint] Avoid DOC201 on explicit returns in functions that only return None (#13064)

Rule changes

  • [flake8-async] Disable check for asyncio before Python 3.11 (ASYNC109) (#13023)

Bug fixes

  • [FastAPI] Avoid introducing invalid syntax in fix for fast-api-non-annotated-dependency (FAST002) (#13133)
  • [flake8-implicit-str-concat] Normalize octals before merging concatenated strings in single-line-implicit-string-concatenation (ISC001) (#13118)
  • [flake8-pytest-style] Improve help message for pytest-incorrect-mark-parentheses-style (PT023) (#13092)
  • [pylint] Avoid autofix for calls that aren't min or max as starred expression (PLW3301) (#13089)
  • [ruff] Add datetime.time, datetime.tzinfo, and datetime.timezone as immutable function calls (RUF009) (#13109)
  • [ruff] Extend comment deletion for RUF100 to include trailing text from noqa directives while preserving any following comments on the same line, if any (#13105)
  • Fix dark theme on initial page load for the Ruff playground (#13077)

0.6.2

Preview features

  • [flake8-simplify] Extend open-file-with-context-handler to work with other standard-library IO modules (SIM115) (#12959)
  • [ruff] Avoid unused-async for functions with FastAPI route decorator (RUF029) (#12938)
  • [ruff] Ignore fstring-missing-syntax (RUF027) for fastAPI paths (#12939)
  • [ruff] Implement check for Decimal called with a float literal (RUF032) (#12909)

Rule changes

  • [flake8-bugbear] Update diagnostic message when expression is at the end of function (B015) (#12944)
  • [flake8-pyi] Skip type annotations in string-or-bytes-too-long (PYI053) (#13002)
  • [flake8-type-checking] Always recognise relative imports as first-party (#12994)
  • [flake8-unused-arguments] Ignore unused arguments on stub functions (ARG001) (#12966)
  • [pylint] Ignore augmented assignment for self-cls-assignment (PLW0642) (#12957)

Server

  • Show full context in error log messages (#13029)

Bug fixes

  • [pep8-naming] Don't flag from imports following conventional import names (N817) (#12946)
  • [pylint] - Allow __new__ methods to have cls as their first argument even if decorated with @staticmethod for bad-staticmethod-argument (PLW0211) (#12958)

Documentation

... (truncated)

Commits
  • ee258ca Bump version to 0.6.3 (#13152)
  • b4d9d26 Update faq.md to highlight changes to src (#13145)
  • a998320 [ruff] - extend comment deletions for unused-noqa (RUF100) (#13105)
  • 770ef2a [red-knot] support deferred evaluation of type expressions (#13131)
  • c6023c0 [red-knot] Add docs on using RAYON_NUM_THREADS for better logging (#13140)
  • df694ca [FastAPI] Avoid introducing invalid syntax in fix for `fast-api-non-annotat...
  • 2e75cfb Format PYI examples in docs as .pyi-file snippets (#13116)
  • cfafaa7 [red-knot] Remove very noisy tracing call when resolving ImportFrom stateme...
  • 3e9c7ad Replace crates by dependi for VS Code Dev Container (#13125)
  • 81cd438 red-knot: infer and display ellipsis type (#13124)
  • Additional commits viewable in compare view


Updates black from 24.4.2 to 24.8.0

Release notes

Sourced from black's releases.

24.8.0

Stable style

  • Fix crash when # fmt: off is used before a closing parenthesis or bracket. (#4363)

Packaging

  • Packaging metadata updated: docs are explictly linked, the issue tracker is now also linked. This improves the PyPI listing for Black. (#4345)

Parser

  • Fix regression where Black failed to parse a multiline f-string containing another multiline string (#4339)
  • Fix regression where Black failed to parse an escaped single quote inside an f-string (#4401)
  • Fix bug with Black incorrectly parsing empty lines with a backslash (#4343)
  • Fix bugs with Black's tokenizer not handling \{ inside f-strings very well (#4422)
  • Fix incorrect line numbers in the tokenizer for certain tokens within f-strings (#4423)

Performance

  • Improve performance when a large directory is listed in .gitignore (#4415)

Blackd

  • Fix blackd (and all extras installs) for docker container (#4357)
Changelog

Sourced from black's changelog.

24.8.0

Stable style

  • Fix crash when # fmt: off is used before a closing parenthesis or bracket. (#4363)

Packaging

  • Packaging metadata updated: docs are explictly linked, the issue tracker is now also linked. This improves the PyPI listing for Black. (#4345)

Parser

  • Fix regression where Black failed to parse a multiline f-string containing another multiline string (#4339)
  • Fix regression where Black failed to parse an escaped single quote inside an f-string (#4401)
  • Fix bug with Black incorrectly parsing empty lines with a backslash (#4343)
  • Fix bugs with Black's tokenizer not handling \{ inside f-strings very well (#4422)
  • Fix incorrect line numbers in the tokenizer for certain tokens within f-strings (#4423)

Performance

  • Improve performance when a large directory is listed in .gitignore (#4415)

Blackd

  • Fix blackd (and all extras installs) for docker container (#4357)
Commits
  • b965c2a Prepare release 24.8.0 (#4426)
  • 9ccf279 Document find_project_root ignoring pyproject.toml without [tool.black]...
  • 14b6e61 fix: Enhace black efficiently to skip directories listed in .gitignore (#4415)
  • b1c4dd9 fix: respect braces better in f-string parsing (#4422)
  • 4b4ae43 Fix incorrect linenos on fstring tokens with escaped newlines (#4423)
  • 7fa1faf docs: fix the installation command of extra for blackd (#4413)
  • 8827acc Bump sphinx from 7.3.7 to 7.4.0 in /docs (#4404)
  • b0da11d Bump furo from 2024.5.6 to 2024.7.18 in /docs (#4409)
  • 721dff5 fix: avoid formatting backslash strings inside f-strings (#4401)
  • 7e2afc9 Update actions/checkout to v4 to stop node deprecation warnings (#4379)
  • Additional commits viewable in compare view


Updates mypy from 1.11.1 to 1.11.2

Commits
  • 789f02c Bump version to 1.11.2
  • 917cc75 An alternative fix for a union-like literal string (#17639)
  • 7d805b3 Unwrap TypedDict item types before storing (#17640)
  • 32675dd Revert "Fix Literal strings containing pipe characters" (#17638)
  • 778542b Revert "Fix RawExpressionType.accept crash with --cache-fine-grained" (#1...
  • 14ab742 Bump version to 1.11.2+dev
  • See full diff in compare view


Updates mkdocs from 1.6.0 to 1.6.1

Release notes

Sourced from mkdocs's releases.

1.6.1

Version 1.6.1 (Friday 30th August, 2024)

Fixed

  • Fix build error when environment variable SOURCE_DATE_EPOCH=0 is set. #3795
  • Fix build error when mkdocs_theme.yml config is empty. #3700
  • Support python -W and PYTHONWARNINGS instead of overriding the configuration. #3809
  • Support running with Docker under strict mode, by removing 0.0.0.0 dev server warning. #3784
  • Drop unnecessary changefreq from sitemap.xml. #3629
  • Fix JavaScript console error when closing menu dropdown. #3774
  • Fix JavaScript console error that occur on repeated clicks. #3730
  • Fix JavaScript console error that can occur on dropdown selections. #3694

Added

  • Added translations for Dutch. #3804
  • Added and updated translations for Chinese (Simplified). #3684
Commits


Updates mkdocs-material from 9.5.30 to 9.5.34

Release notes

Sourced from mkdocs-material's releases.

mkdocs-material-9.5.34

  • Updated Mermaid.js to version 11 (latest)

Thanks go to @​manselmi for their contributions

mkdocs-material-9.5.33

  • Fixed #7453: Incorrect position of tooltip when sorting table

mkdocs-material-9.5.32

  • Fixed RXSS vulnerability via deep link in search results
  • Added support for fetching latest release from GitLab

Thanks go to @​joaopalmeiro for their contributions

mkdocs-material-9.5.31

  • Fixed #7405: DockerHub missing images > 9.5.27 due to change in Alpine/APK
Changelog

Sourced from mkdocs-material's changelog.

mkdocs-material-9.5.34 (2024-08-31)

  • Updated Mermaid.js to version 11 (latest)

mkdocs-material-9.5.33 (2024-08-23)

  • Fixed #7453: Incorrect position of tooltip when sorting table

mkdocs-material-9.5.32 (2024-08-19)

  • Fixed RXSS vulnerability via deep link in search results
  • Added support for fetching latest release from GitLab

mkdocs-material-9.5.31+insiders-4.53.12 (2024-08-02)

  • Fixed #7410: Instant previews jump on content tabs with anchor links
  • Fixed #7408: Instant previews jump on content tabs

mkdocs-material-9.5.31 (2024-08-02)

  • Fixed #7405: DockerHub missing images > 9.5.27 due to change in Alpine/APK

mkdocs-material-9.5.30 (2024-07-23)

  • Fixed #7380: Navigation icons disappearing on hover in Safari
  • Fixed #7367: Blog readtime computation includes SVG text content

mkdocs-material-9.5.29 (2024-07-14)

  • Updated Galician translations
  • Fixed #7362: Annotations in figure captions rendering incorrectly

mkdocs-material-9.5.28 (2024-07-02)

  • Fixed #7313: Improved tooltips mounted in sidebar when feature is disabled

mkdocs-material-9.5.27 (2024-06-16)

  • Updated Estonian translations

mkdocs-material-9.5.26 (2024-06-06)

  • Fixed #7232: Tab switches on scroll when linking tabs (9.5.19 regression)
  • Fixed #7230: Blog author avatar broken when referring to local file

mkdocs-material-9.5.25+insiders-4.53.11 (2024-05-27)

  • Fixed projects plugin crashing when serving before building subprojects

mkdocs-material-9.5.25 (2024-05-27)

... (truncated)

Commits


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📚 Documentation preview 📚: https://ncompare--252.org.readthedocs.build/en/252/

dependabot[bot] commented 1 month ago

Looks like these dependencies are updatable in another way, so this is no longer needed.