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nasqar / seuratv3wizard

A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3
http://nasqar.abudhabi.nyu.edu/SeuratV3Wizard
GNU General Public License v3.0
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error in startup #18

Open honghh2018 opened 3 years ago

honghh2018 commented 3 years ago

Hi, When i start up this app, it give me above error. image image

how can i fix this? any advice would be thanks. Best, hanhuihong

honghh2018 commented 3 years ago

Had any advices for this?

TapanBaral commented 1 year ago

Had any advices for this?

Had any advices for this?

Had any advices for this?

I'm also getting the same issue. Did you resolve it?

PengBingming commented 1 year ago

I'm also getting the same issue. Did anyone resolve it?

PengBingming commented 1 year ago

I find the ui.R file, add functions= c() in " extendShinyjs(script = "www/custom.js") ". It become extendShinyjs(script = "www/custom.js",functions= c() ) . Though the app is running, but the input data is not working.

TapanBaral commented 1 year ago

I modified in th ui.r as is follow and it's working for me #extendShinyjs(script = "www/custom.js",functions = c("addStatusIcon","collapse"))

PengBingming commented 1 year ago

1683277987337 I modified my ui.R too, but when I using the example data to analyse, this error is coming.

PengBingming commented 1 year ago

Listening on http://127.0.0.1:5555 [1] "inputting data" [1] "analysisCountDataReactive" [1] "inputting data" Warning: Error in value[[3L]]: attempt to apply non-function 73: value[[3L]] [server-initInputData.R#169]

TapanBaral commented 1 year ago

set your working directory to ~/Path_to/seuratv3wizard/inst/shiny then shiny::runApp() It will work