Closed Li-mengjie closed 1 year ago
Please download the data here: https://www.dropbox.com/s/qybq5si359stdx1/ROSMAP.VascularCells.counts_full.rds?dl=0
Hi,
Please find the data here https://www.dropbox.com/s/qybq5si359stdx1/ROSMAP.VascularCells.counts_full.rds?dl=0, which is the same in readme.txt. We will fix the file from the website, which is curated for some reason. Sorry for the inconvenience.
Best,
Na Sun Ph.D student, Computational Biology Group CSAIL Department of EECS, MIT 32 Vassar Street, 32D-526 Cambridge, MA 02139 Email: @.**@.>
From: Li-mengjie @.> Date: Friday, July 7, 2023 at 1:18 AM To: nasunmit/scadbbb @.> Cc: Subscribed @.***> Subject: [nasunmit/scadbbb] Data reading error (Issue #3)
Hello, in fact, when I try to read the "ROSMAP.VascularCells.counts_full.rds" file using R (version 4.3.0 or 3.5), from the website http://compbio.mit.edu/scADbbb/, I always encounter the following error: "Error in readRDS("C:/Users/l1573/Desktop/ROSMAP.VascularCells.counts_full.rds"): error reading from connection." I have been unable to resolve this error, and I suspect it may be due to compatibility issues with the R version. However, I am very interested in this dataset, so I would like to ask if the author can share the 10X data in standard format with me. I would greatly appreciate it.The size of the data I downloaded is 33,554,432 bytes. [Image removed by sender. image]https://user-images.githubusercontent.com/99384654/251643573-c4657e5c-3ef7-463b-a363-09db7b16f0f6.png
— Reply to this email directly, view it on GitHubhttps://github.com/nasunmit/scadbbb/issues/3, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AR3WIHODCE4WUPHL2M4OVUTXO6L3BANCNFSM6AAAAAA2BKIUDY. You are receiving this because you are subscribed to this thread.Message ID: @.***>
Hi! I have downloaded the latest file and successfully opened it. Thank you again for your assistance.
Hello, in fact, when I try to read the "ROSMAP.VascularCells.counts_full.rds" file using R (version 4.3.0 or 3.5), from the website http://compbio.mit.edu/scADbbb/, I always encounter the following error: "Error in readRDS("C:/Users/l1573/Desktop/ROSMAP.VascularCells.counts_full.rds"): error reading from connection." I have been unable to resolve this error, and I suspect it may be due to compatibility issues with the R version. However, I am very interested in this dataset, so I would like to ask if the author can share the 10X data in standard format with me. I would greatly appreciate it.The size of the data I downloaded is 33,554,432 bytes.