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nateosher / DIMPLE

MIT License
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Naming overhaul #92

Closed nateosher closed 1 year ago

nateosher commented 1 year ago

Here's an overview of what actually changed:

plot_scatter_dist -> plot_dist_scatter plot_pairwise_group_heatmap -> plot_dist_regression_heatmap plot_matrix_heatmap -> plot_simulation_heatmap plot_intensities -> plot_intensity_surface plot_dist -> plot_dist_matrix group_boxplots -> plot_dist_boxplots plot_qdist -> plot_qdist_matrix plot_quantile_mask -> plot_quantile_intensity_surface filter_exp -> filter_MltplxExp

And, of course, the corresponding tests

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 98.13% and project coverage change: +0.22 :tada:

Comparison is base (e306780) 96.12% compared to head (195ed9e) 96.34%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #92 +/- ## ========================================== + Coverage 96.12% 96.34% +0.22% ========================================== Files 32 32 Lines 1007 1013 +6 ========================================== + Hits 968 976 +8 + Misses 39 37 -2 ``` | [Impacted Files](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | Coverage Δ | | |---|---|---| | [R/filter\_MltplxExp.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9maWx0ZXJfTWx0cGx4RXhwLlI=) | `100.00% <ø> (ø)` | | | [R/filter\_mltplx\_objects.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9maWx0ZXJfbWx0cGx4X29iamVjdHMuUg==) | `100.00% <ø> (ø)` | | | [R/pat.density.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wYXQuZGVuc2l0eS5S) | `93.33% <ø> (ø)` | | | [R/plot\_quantile\_intensity\_surface.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wbG90X3F1YW50aWxlX2ludGVuc2l0eV9zdXJmYWNlLlI=) | `90.62% <ø> (ø)` | | | [R/plot\_simulation\_heatmap.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wbG90X3NpbXVsYXRpb25faGVhdG1hcC5S) | `85.71% <ø> (ø)` | | | [R/MltplxObject.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9NbHRwbHhPYmplY3QuUg==) | `96.84% <96.87%> (+0.01%)` | :arrow_up: | | [R/generics.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9nZW5lcmljcy5S) | `100.00% <100.00%> (ø)` | | | [R/plot\_dist\_boxplots.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wbG90X2Rpc3RfYm94cGxvdHMuUg==) | `100.00% <100.00%> (ø)` | | | [R/plot\_dist\_matrix.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wbG90X2Rpc3RfbWF0cml4LlI=) | `100.00% <100.00%> (ø)` | | | [R/plot\_dist\_regression\_heatmap.R](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-Ui9wbG90X2Rpc3RfcmVncmVzc2lvbl9oZWF0bWFwLlI=) | `100.00% <100.00%> (ø)` | | | ... and [3 more](https://codecov.io/gh/nateosher/DIMPLE/pull/92?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None)

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