natverse / fafbseg

Support functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain
https://natverse.org/fafbseg/
GNU General Public License v3.0
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Adapt to breaking changes in fafbseg-py #193

Closed jefferis closed 6 months ago

jefferis commented 7 months ago

Inc l2 skels. See https://github.com/navis-org/fafbseg-py/blob/master/changelog.md

schlegelp commented 7 months ago

Was about to open an issue myself but you got there first.

jefferis commented 7 months ago

@schlegelp how do I authenticate fafbseg.flywire now that the default is to use the public dataset only?

jefferis commented 7 months ago

I think I can do something like:

fp.flywire.set_default_dataset('flywire_fafb_production')

to choose the production dataset and it should pick up the auth token from the standard location.

schlegelp commented 7 months ago

Yes, that will set the default dataset for the session. You can also pass a dataset="production" parameter directly to the respective functions.

jefferis commented 6 months ago

closed by #194