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natverse / neuprintr

R client utilities for interacting with the neuPrint connectome analysis service
http://natverse.org/neuprintr
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neuprint_ROI_connectivity is not working #20

Closed romainFr closed 4 years ago

romainFr commented 4 years ago

Errors in extract_connectivity_df with: "Error in startsWith(names(a), paste0(roi, ".")) : non-character object(s)"

Note that the api query does not return results for all ROIs in neuprint explorer either

romainFr commented 4 years ago

One change one could make here is use "api/cached/roiconnectivity" which is a cached version of the full results instead of "api/npexplorer/roiconnectivity" which gathers the results. It would be much faster but would potentially lag by a day when the dataset is changing.

I think I'll make it an option for now.