Closed mmc46 closed 4 years ago
There is an error when using neuprint_read_neuron_simple()
.
test = neuprint_read_neuron_simple(opn.info$bodyid)
21/109 [=============>----------------------------------------------------------] eta: 47sError in as.neuron.ngraph(as.ngraph(x), vertexData = x, ...) :
Invalid neuron! Must contain at least one segment with 2 points
In addition: There were 19 warnings (use warnings() to see them)
warnings()
Warning messages:
1: In as.seglist.igraph(masterg <- x, origin = origin, Verbose = Verbose) :
Multiple origins found! Using first origin.
2: In as.seglist.igraph(masterg <- x, origin = origin, Verbose = Verbose) :
Multiple origins found! Using first origin.
3: In as.seglist.igraph(masterg <- x, origin = origin, Verbose = Verbose) :
Multiple origins found! Using first origin.
...
Warnings have been added to the new branch new-heal
so will be operable when this branch is merged into master later this week. This branch works, so you can use it for no w if you like:
remotes::install_github("natverse/neuprintr", ref="new-heal")
Can I confirm that all 109 neurons are read in that case?
Closed by #76
Example from https://github.com/natverse/neuprintr/blob/master/vignettes/hemibrain_opns.Rmd
neuprint_search()
with default OmitFailures = NA