natverse / neuprintr

R client utilities for interacting with the neuPrint connectome analysis service
http://natverse.org/neuprintr
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Add statusLabel to neuprint_get_meta #73

Closed mmc46 closed 4 years ago

mmc46 commented 4 years ago

There is a new field, statusLabel in the metadata - it shows in neuprint-python.

Can this be added to the output of neuprint_get_meta()?

We think the difference between status and statusLabel is due to the fact that just before the release many bodyids got the status 'Traced' even though their status at the time was not 'Traced'. So status reflects the value in the released dataset, whereas statusLabel corresponds to the previous one.

For example: bodyids

c("2292327595", "2262328440", "2262332862", "2262324061", "2231289277",
"2200228798", "2231289424", "2230931053", "2231298154", "2262328549",
"2231298121", "2261992182", "2230931155", "2231289333", "2261637853",
"2321337738", "2320983805", "2292672665", "2200228767", "2230931077",
"5813046796", "2230926964", "2231293853", "2200228723", "2261987736",
"2320655662", "2231284881", "2261965878", "2261970553", "2231293819",
"2321001244", "2231289597", "2231289459", "2200569724", "2291999690",
"2290303228", "2262324036", "5813034811", "2231298170", "2231289545",
"5813005580")

have status == 'Traced' and statusLabel == 'Leaves'

jefferis commented 4 years ago

Do we have any more info than that? Seems rather vague thing to add to documentation.

mmc46 commented 4 years ago

statusLabel does shows here https://neuprint-test.janelia.org/public/neuprintuserguide_012420.pdf

"statusLabel - a string indicating the status of the body in a previous version of the data"

jefferis commented 4 years ago

Ok! So it is vague!

romainFr commented 4 years ago

I asked, and have been told that statusLabel is a more detailed version of status. In status, a bunch of things (like leaves and roughly traced) are lumped together as Traced.

jefferis commented 4 years ago

@romainFr are we happy with:

\item statusLabel similar to \code{status} but often a bit more specific

romainFr commented 4 years ago

yes!