Can I use IDR to analyze ChIPseq or Cuttag data of histones?

nboley / idr

IDR

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Can I use IDR to analyze ChIPseq or Cuttag data of histones? #51

Open AIBio opened 4 years ago

AIBio commented 4 years ago

Hi, I'm confusing about how to get the reproducible peaks from replicates of histone data. The IDR is recommended in ENCODE pipeline for TF ChIPseq data. How about histone data? Can I continue to use IDR to do the same task? I'm looking forward your reply. Thanks~ Hanwen