Closed daquang closed 9 years ago
The code, as it is, does not work with bed files. Changing line 45 of idr.py should do the trick. Currently, that line says "data[5]". I believe it should be "data[3]", as you want the strand information.
Sorry, stand corrected. The original line is correct. Hotspot files do not include strand information, which is why the little hack worked.
The code, as it is, does not work with bed files. Changing line 45 of idr.py should do the trick. Currently, that line says "data[5]". I believe it should be "data[3]", as you want the strand information.