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Calculate Effect Size from Chemical Class Enrichment #68

Open jnstyles5 opened 6 months ago

jnstyles5 commented 6 months ago

This is not necessarily an issue, but how would someone calculate effect size from chemical class enrichment results? I've looked at a few methods for fisher exact test such as Cramer's V or odds ratio, but it's not clear to me how to apply the output from chemical class enrichment to these methods. Perhaps you have a better suggestion for calculating an effect size?

Thank you for your help!

Mathelab commented 5 months ago

Hello, Would returning the odds ratio from the Fisher's test be helpful? Best, Ewy